Index

A

AF_scatter() (SNPmanifold.SNP_VAE method)

C

cluster_heatmap() (SNPmanifold.SNP_VAE method)

clustering() (SNPmanifold.SNP_VAE method) clustering_summary() (SNPmanifold.SNP_VAE method)

F

filtering() (SNPmanifold.SNP_VAE method)

filtering_summary() (SNPmanifold.SNP_VAE method)

M

module SNPmanifold

P

phylogeny() (SNPmanifold.SNP_VAE method)

phylogeny_summary() (SNPmanifold.SNP_VAE method)

R

retrain_umap() (SNPmanifold.SNP_VAE method)

S

SNP_heatmap() (SNPmanifold.SNP_VAE method) SNP_VAE (class in SNPmanifold)

SNPmanifold module

T

training() (SNPmanifold.SNP_VAE method)

training_summary() (SNPmanifold.SNP_VAE method)