Installation

Environment setting (optional)

You may consider create a separate conda environment for using SNPmanifold. See more in conda manual.

Easy install

SNPmanifold is available on PYPI. To install, type the following command line, and add -U for upgrading:

pip install -U SNPmanifold

Alternatively, you can install from this GitHub repository for the latest (often development) version by the following command line:

pip install -U git+https://github.com/StatBiomed/SNPmanifold

In either case, if you don’t have write permission for your current Python environment, add --user, but check the previous section above for creating your own conda environment.